3.3 Organic Chemistry · Year 12

3.3.6 Organic Analysis

Combine chemical tests, infrared spectra and mass spectra to identify organic compounds.

What you need to know

Open a line for a quick recap. If it feels obvious, move straight to the linked practice.

3.3.6.1 Recall the characteristic reactions of the organic functional groups specified for AQA. Quick revision

Know the characteristic tests/reactions for the functional groups in the course, but learn them as evidence: reagent, condition where needed, observation and what that observation tells you about the structure.

For example, bromine tests for C=C, acidified dichromate distinguishes oxidisable alcohols/aldehydes in the right context, and Tollens’ or Fehling’s can distinguish aldehydes from ketones.

3.3.6.1 Use those characteristic reactions and observations to identify functional groups in an unknown organic compound. Quick revision

When an unknown is tested, translate each observation into a structural constraint before choosing a molecule. A positive test can support a functional group; a negative test can eliminate structures that should have reacted.

Use several observations together. One colour change rarely identifies a whole molecule uniquely, but a consistent set of functional-group evidence can narrow the possibilities sharply.

Watch forState both the observation and what it implies. A colour alone is not a structural conclusion.
3.3.6.2 Know that mass spectrometry can be used to determine the molecular formula of a compound. Quick revision

If you have a precise molecular mass from mass spectrometry, you can use it to distinguish candidate molecular formulae that share the same nominal whole-number mass. Their exact masses differ slightly because the constituent atoms have different precise isotopic masses.

Use the precise isotopic masses from the data you are given to test candidate formulae. A rounded nominal mass may fit several possibilities; the accurate molecular mass can separate them.

Watch forPrecise molecular mass can distinguish different molecular formulae; structural isomers with the same molecular formula are not separated by this information alone.
3.3.6.2 Combine accurate isotopic masses with precise molecular mass to select a molecular formula. Quick revision

Calculate the precise molecular mass of each plausible formula from the precise atomic masses, then compare those values with the measured precise molecular mass. Choose the formula whose calculated value matches the measurement.

Keep enough decimal places during the comparison: the whole point is that formulae with the same nominal mass can differ slightly in precise mass. Formulae that are structural isomers of one another still have the same precise molecular mass.

Worked example

Two candidate molecular formulae have calculated precise masses of 43.9898 and 44.0262. The measured precise molecular mass is 44.0260.

  1. Compare the measured value with each calculated precise mass.
  2. 44.0260 is much closer to 44.0262 than to 43.9898.

Answer Choose the candidate whose calculated precise mass is 44.0262.

Watch forPrecise mass can distinguish different molecular formulae; it cannot distinguish structural isomers that share the same formula.
3.3.6.3 Explain IR absorption in terms of bond vibrations at characteristic wavenumbers and use whole-spectrum fingerprint comparison where appropriate. Quick revision

With an IR spectrum, use characteristic absorption regions to identify likely bonds or functional groups. The absorption occurs when the IR frequency matches an allowed molecular vibration.

The fingerprint region contains a more complex whole-molecule pattern. Comparing it with an authentic reference spectrum can strengthen an identification when the conditions are appropriate.

3.3.6.3 Connect IR absorption by CO₂, methane and water vapour with their greenhouse effect. Quick revision

If you’re connecting greenhouse gases with IR, the key is that CO₂, CH₄ and H₂O absorb infrared radiation at frequencies associated with molecular vibrations. They can then re-emit some of that energy, reducing the rate at which it escapes directly to space.

3.3.6.3 Use IR spectra plus the AQA data sheet/booklet to identify bonds, functional groups and possible impurities. Quick revision

Use the AQA infrared data to match significant absorptions to bonds and functional groups, then check the whole spectrum against the proposed structure. An unexpected absorption can indicate an impurity; an expected group should normally have the relevant diagnostic absorption present.

Worked example

An unknown with molecular formula C₃H₆O₂ shows a strong C=O absorption near 1700 cm⁻¹ and a very broad O–H absorption in the carboxylic-acid region. What functional group is indicated?

  1. The strong absorption near 1700 cm⁻¹ indicates C=O.
  2. The very broad acid O–H absorption rules out an ester as the only oxygen-containing group.
  3. C=O together with the acid O–H pattern indicates a carboxylic acid.

Answer The spectrum is consistent with a carboxylic acid, for example propanoic acid.

Watch forUse diagnostic absorptions and absences together; do not identify a whole structure from one vague IR peak.